Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012553.1 Corchorus olitorius cultivar O-4 contig12586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24471

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7343--7370
14
2.0
14
100
0
56
42
14
7
35
1.73
9226--9286
34
1.9
32
87
12
90
21
8
14
55
1.65
9193--9647
173
2.6
174
94
2
797
20
9
17
52
1.71
9574--9634
34
1.9
32
87
12
90
21
8
13
57
1.62
10444--10480
17
2.2
17
95
0
65
16
5
18
59
1.55
14727--14761
17
2.1
17
88
0
52
14
20
0
65
1.26
15865--15931
29
2.2
33
80
17
74
26
17
29
25
1.98
18433--18473
20
2.2
20
86
8
59
21
9
4
63
1.44
18986--19029
20
2.2
20
100
0
88
38
36
0
25
1.56
19759--19801
19
2.3
19
91
0
68
53
11
23
11
1.69
23085--23122
2
19.0
2
100
0
76
0
50
0
50
1.00
23127--23158
16
2.1
15
94
5
55
46
3
31
18
1.65
23169--23211
20
2.2
20
87
8
61
25
9
18
46
1.79

Tables:   1

The End!