Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012556.1 Corchorus olitorius cultivar O-4 contig12589, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4553

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
461--505
22
2.0
22
100
0
90
42
8
8
40
1.67
954--990
15
2.5
15
100
0
74
10
5
21
62
1.48
1052--1109
30
1.9
30
100
0
116
27
5
22
44
1.74
2480--2701
107
2.1
106
79
6
234
40
10
6
41
1.65
3222--3254
17
2.1
16
88
11
50
30
0
0
69
0.88
3912--4006
47
2.0
47
100
0
190
46
6
14
32
1.70
4102--4145
16
2.9
16
81
18
51
70
0
0
29
0.88
4101--4142
15
2.8
15
79
10
50
69
0
0
30
0.89

Tables:   1

The End!