Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012557.1 Corchorus olitorius cultivar O-4 contig12590, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53276

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1836--1883
17
2.8
17
100
0
96
25
39
10
25
1.87
2256--2294
19
2.1
19
85
0
51
20
28
10
41
1.85
2345--2402
19
2.9
19
87
5
80
29
22
12
36
1.90
8025--8107
2
41.5
2
92
0
139
2
1
50
45
1.22
11779--11832
11
5.3
10
78
17
58
42
0
18
38
1.50
22671--22852
88
2.0
89
91
2
294
36
11
8
43
1.71
22970--22999
15
2.0
15
93
0
51
70
13
3
13
1.30
25965--26053
30
2.9
30
72
9
72
33
16
15
33
1.91
26592--26655
33
1.9
33
87
0
92
31
26
20
21
1.98
40667--40704
18
2.0
20
90
10
62
36
5
5
52
1.47
52447--52505
21
3.0
19
83
9
82
35
10
22
32
1.87
53057--53135
40
2.0
39
85
2
104
41
7
18
31
1.79

Tables:   1

The End!