Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012569.1 Corchorus olitorius cultivar O-4 contig12602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20142

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31--85
28
2.0
27
86
10
76
12
10
27
49
1.74
2198--2307
58
1.9
58
88
3
168
34
14
17
33
1.90
4126--4537
203
2.0
203
94
1
720
44
8
10
36
1.70
6838--6895
27
2.1
29
81
12
68
55
1
0
43
1.10
6988--7048
29
2.1
30
87
3
88
42
3
3
50
1.34
7837--7896
26
2.3
26
94
0
102
33
15
3
48
1.61
10938--10996
31
2.0
30
86
6
84
28
20
11
38
1.88
11569--11598
15
2.0
15
100
0
60
0
6
33
60
1.23
12339--12380
18
2.3
18
84
8
50
30
2
42
23
1.67

Tables:   1

The End!