Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012570.1 Corchorus olitorius cultivar O-4 contig12603, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7390

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1292--1327
12
2.9
12
88
8
54
55
0
8
36
1.30
1292--1324
13
2.6
13
90
4
50
57
0
9
33
1.30
1490--2081
294
2.0
296
89
3
917
24
16
16
42
1.88
4611--4807
22
9.0
22
86
1
261
12
25
6
55
1.60
4820--5286
47
9.8
47
85
5
589
22
20
6
50
1.71
4820--5277
148
3.2
142
84
5
611
22
20
6
50
1.70
4820--5277
95
4.8
95
85
7
599
22
20
6
50
1.70
4812--5265
243
1.9
239
89
1
710
23
20
6
49
1.71

Tables:   1

The End!