Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012571.1 Corchorus olitorius cultivar O-4 contig12604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42187

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1656--1713
21
2.8
21
91
0
89
29
27
12
31
1.92
13357--13496
70
2.0
69
87
4
201
47
15
14
22
1.81
14080--14148
29
2.3
30
90
5
113
14
24
5
55
1.61
14171--14227
17
3.3
17
90
4
87
14
29
1
54
1.50
15299--15415
21
5.6
21
92
2
182
27
27
15
29
1.96
17258--17403
33
4.5
31
78
10
123
43
21
8
26
1.82
19865--19981
21
5.6
21
92
2
182
27
27
15
29
1.96
28395--29067
52
13.0
52
91
0
1051
28
16
18
35
1.93
28630--28716
24
3.5
24
65
11
66
26
16
17
40
1.90
28838--28924
24
3.5
24
70
11
75
28
16
14
40
1.88
33824--33873
21
2.4
21
90
6
75
28
26
18
28
1.98
35614--35718
33
3.2
31
81
11
111
43
23
6
25
1.78
38560--38595
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!