Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012572.1 Corchorus olitorius cultivar O-4 contig12605, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8724

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
482--535
25
2.2
25
100
0
108
44
7
24
24
1.79
1237--1796
40
14.1
40
92
1
831
36
10
20
31
1.87
1102--1796
80
8.8
80
87
2
846
37
11
20
30
1.88
1102--1796
120
5.8
120
87
1
846
37
11
20
30
1.88
1846--2263
145
2.9
140
83
7
512
32
16
21
29
1.95
3475--3500
7
3.7
7
100
0
52
23
15
0
61
1.33
3516--3578
17
3.8
17
78
15
53
4
9
6
79
1.05
3533--3581
24
2.1
23
85
11
64
4
6
6
83
0.90

Tables:   1

The End!