Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012576.1 Corchorus olitorius cultivar O-4 contig12609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17279

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1591--1684
44
2.1
45
92
2
154
41
7
13
37
1.73
5026--5080
27
2.0
27
100
0
110
18
10
10
60
1.59
9779--9827
13
3.7
13
94
2
80
40
20
6
32
1.77
13383--13407
12
2.1
12
100
0
50
32
32
0
36
1.58
15989--16019
2
15.5
2
100
0
62
48
0
0
51
1.00
16188--16234
13
3.8
12
78
13
51
40
0
4
55
1.19

Tables:   1

The End!