Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012581.1 Corchorus olitorius cultivar O-4 contig12614, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6811

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1217--1289
16
4.6
16
83
6
94
8
12
36
42
1.72
1219--1289
31
2.2
31
87
5
97
8
12
38
40
1.74
1301--1341
16
2.5
17
76
15
50
4
14
36
43
1.67
2355--2389
11
3.2
11
87
0
52
2
2
14
80
0.95
3437--3483
24
2.0
24
95
0
85
17
8
34
40
1.79
4636--4684
25
2.0
25
95
0
89
34
18
32
14
1.91
5452--5534
43
1.9
43
90
4
132
44
4
4
45
1.46
6096--6136
16
2.6
16
92
0
73
24
36
21
17
1.94
6370--6445
35
2.2
35
88
4
109
55
9
13
22
1.66
6570--6682
21
5.4
21
93
2
174
29
15
27
27
1.96

Tables:   1

The End!