Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012582.1 Corchorus olitorius cultivar O-4 contig12615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10527

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
990--1044
18
3.1
18
91
0
92
29
10
32
27
1.91
2220--2253
15
2.2
16
89
5
52
35
0
0
64
0.94
4023--4113
42
2.2
42
97
0
173
34
13
23
29
1.92
4750--4783
11
3.1
11
100
0
68
8
44
8
38
1.67
9862--10527
41
16.8
40
78
9
630
13
26
19
40
1.89
10294--10398
33
2.9
33
82
15
129
14
21
22
40
1.90
9862--10527
162
4.2
157
77
9
550
13
26
19
40
1.89

Tables:   1

The End!