Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012590.1 Corchorus olitorius cultivar O-4 contig12623, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5313

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3892--3998
2
59.0
2
68
22
58
42
0
1
56
1.10
3893--3992
23
4.6
23
70
25
74
41
0
2
57
1.10
4079--4118
15
2.7
15
88
3
55
67
15
2
15
1.34
4079--4118
7
5.6
7
91
5
62
67
15
2
15
1.34
4896--4932
17
2.2
17
100
0
74
29
5
16
48
1.68

Tables:   1

The End!