Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012597.1 Corchorus olitorius cultivar O-4 contig12630, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10327

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--884
154
5.7
153
89
2
1322
40
18
18
22
1.92
1--884
307
2.9
307
89
1
1342
40
18
18
22
1.92
3291--3521
77
3.0
77
100
0
462
35
15
18
31
1.92
9326--9575
127
2.0
127
98
0
482
31
12
24
30
1.93
10262--10317
12
4.6
12
86
4
67
39
16
17
26
1.91
10262--10317
25
2.3
24
84
3
67
39
16
17
26
1.91

Tables:   1

The End!