Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012601.1 Corchorus olitorius cultivar O-4 contig12634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10487

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6206--6299
45
2.2
43
83
7
120
38
21
5
35
1.76
7379--7541
60
2.7
59
83
6
211
28
19
19
32
1.96
7699--7765
34
2.0
34
100
0
134
14
43
5
35
1.71
8291--8365
25
3.0
25
80
0
96
26
25
22
25
2.00
9091--9132
20
2.1
20
90
0
66
33
30
21
14
1.93
9782--9826
11
4.1
11
100
0
90
37
8
44
8
1.67

Tables:   1

The End!