Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012605.1 Corchorus olitorius cultivar O-4 contig12638, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57646

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2779--2809
11
2.8
11
95
0
53
61
3
9
25
1.42
1641--8778
324
22.0
321
77
8
5896
34
14
16
34
1.90
1641--8717
652
10.9
647
78
8
2809
34
14
16
34
1.90
11147--11186
21
2.1
19
86
13
55
25
27
15
32
1.95
11857--11885
2
14.5
2
100
0
58
51
0
0
48
1.00
15899--15928
2
15.0
2
92
0
51
50
3
0
46
1.18
53043--53298
128
2.0
128
97
0
485
24
15
23
36
1.94
56478--56514
18
2.1
18
94
0
65
16
18
45
18
1.85
57465--57500
12
3.0
12
83
0
54
22
38
22
16
1.93

Tables:   1

The End!