Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012606.1 Corchorus olitorius cultivar O-4 contig12639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33867

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
764--905
71
2.0
71
98
0
275
26
14
18
40
1.89
6131--6173
20
2.1
21
86
4
61
20
18
20
39
1.93
6161--6243
42
2.0
43
88
7
125
34
22
19
22
1.96
17481--17517
13
2.8
13
87
0
56
32
8
43
16
1.77
20504--20617
42
2.7
42
98
0
219
14
25
14
44
1.84
21341--21384
6
7.3
6
92
0
70
2
0
79
18
0.83
27899--27954
23
2.4
23
90
0
85
42
10
23
23
1.85
33520--33578
28
2.1
28
90
0
91
35
15
16
32
1.90

Tables:   1

The End!