Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012608.1 Corchorus olitorius cultivar O-4 contig12641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27647

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--42
2
20.5
2
89
0
64
43
0
4
51
1.23
717--745
14
2.0
15
93
6
51
6
10
0
82
0.83
15585--15625
22
1.9
21
85
5
55
36
12
14
36
1.84
26729--26817
39
2.3
39
90
3
144
37
23
15
23
1.93
26902--26941
21
2.0
21
85
5
55
52
17
12
17
1.74
27123--27208
32
2.7
33
80
5
104
43
25
9
22
1.83

Tables:   1

The End!