Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012612.1 Corchorus olitorius cultivar O-4 contig12645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19474

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6251--6294
20
2.3
19
88
4
61
52
6
13
27
1.66
8517--8554
8
4.9
8
83
6
51
5
18
0
76
0.97
9116--9213
41
2.4
41
78
11
103
45
15
16
22
1.84
12477--12512
19
1.9
18
88
5
54
41
8
22
27
1.82
17929--17965
18
2.1
18
89
0
56
45
5
10
37
1.62
18810--18845
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!