Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012613.1 Corchorus olitorius cultivar O-4 contig12646, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20557

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
399--434
18
2.0
18
88
0
54
47
5
11
36
1.63
1283--1318
19
1.9
18
88
5
54
41
8
22
27
1.82
10368--10400
16
2.1
16
100
0
66
36
6
18
39
1.75
10963--11012
21
2.4
21
86
0
64
10
24
48
18
1.78
15111--15152
15
2.7
15
92
3
66
64
14
9
11
1.50
15912--15937
11
2.4
11
100
0
52
69
7
15
7
1.35

Tables:   1

The End!