Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012622.1 Corchorus olitorius cultivar O-4 contig12655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31180

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4102--4141
3
13.3
3
100
0
80
35
0
0
65
0.93
14661--14696
8
4.6
8
96
3
65
25
41
25
8
1.83
17561--17610
15
3.3
15
72
5
55
22
22
4
52
1.64
17532--17613
31
2.7
31
90
1
121
20
19
8
51
1.73
22230--22291
27
2.3
27
91
0
97
38
24
20
16
1.92
27404--27566
74
2.2
74
100
0
326
47
11
12
27
1.76
29506--29544
18
2.1
18
85
4
51
43
15
15
25
1.86

Tables:   1

The End!