Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012624.1 Corchorus olitorius cultivar O-4 contig12657, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44636

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13735--13778
22
2.0
23
86
8
65
15
0
29
54
1.42
15751--15784
17
2.0
17
88
0
50
14
2
2
79
0.97
24337--24561
75
3.0
74
88
1
333
23
26
15
35
1.94
31005--31117
28
3.7
30
85
14
151
35
16
15
32
1.90
31004--31150
67
2.3
63
89
9
221
35
16
17
31
1.92
36969--37015
16
3.1
16
75
9
53
51
17
2
29
1.57
37920--37963
19
2.3
19
88
0
70
20
18
20
40
1.91
39446--39479
17
2.0
17
94
0
59
44
35
5
14
1.70
41457--41485
12
2.3
13
94
5
51
68
0
20
10
1.18

Tables:   1

The End!