Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012625.1 Corchorus olitorius cultivar O-4 contig12658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5643

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3170--3206
11
3.5
11
88
7
58
86
0
13
0
0.57
3171--3205
10
3.4
10
92
4
52
85
0
14
0
0.59
4113--4607
138
3.6
138
93
1
796
28
20
17
34
1.95
4669--4773
37
2.8
37
79
2
120
26
23
10
39
1.87
4753--5123
40
9.3
40
87
4
491
30
19
10
38
1.86
4712--5122
120
3.5
118
87
5
544
30
21
10
37
1.87
4753--5123
159
2.3
160
88
4
536
30
19
10
38
1.86
4709--5123
80
5.2
79
86
4
525
30
20
10
37
1.87
5164--5445
39
7.4
39
74
16
144
29
20
12
37
1.89
4993--5402
147
2.8
147
84
1
509
30
20
10
38
1.87
5164--5270
41
2.7
40
80
9
137
28
20
12
39
1.88
5274--5452
40
4.5
39
84
2
205
29
21
12
36
1.91

Tables:   1

The End!