Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012630.1 Corchorus olitorius cultivar O-4 contig12663, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17004

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1677--1727
19
2.7
19
77
14
61
50
1
0
47
1.12
1923--1984
31
2.0
31
93
0
106
32
20
4
41
1.74
2020--2189
93
1.8
93
93
0
295
32
14
1
51
1.52
2972--3004
17
1.9
17
88
11
50
60
0
0
39
0.97
10699--10738
21
1.9
21
89
0
62
15
22
37
25
1.93
15986--16025
21
2.0
20
90
5
62
22
5
12
60
1.52
16694--16767
29
2.5
30
88
4
105
24
18
13
43
1.86
16901--16966
31
2.2
31
83
5
82
46
12
19
21
1.82
16916--17000
31
2.9
31
89
6
124
43
12
14
29
1.82

Tables:   1

The End!