Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012635.1 Corchorus olitorius cultivar O-4 contig12668, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20007

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1499--1525
13
2.1
13
100
0
54
22
22
22
33
1.97
4925--4954
11
2.7
11
94
0
51
10
10
20
60
1.57
6552--6614
31
2.0
31
81
6
74
46
1
3
49
1.27
10000--10072
36
2.0
36
100
0
146
38
5
27
28
1.79
10601--10625
11
2.3
11
100
0
50
8
16
8
68
1.38
14884--14909
13
2.0
13
100
0
52
15
30
0
53
1.42
17434--17475
15
2.7
15
96
3
75
66
14
7
11
1.43

Tables:   1

The End!