Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012636.1 Corchorus olitorius cultivar O-4 contig12669, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29219

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1526--1638
52
2.2
52
96
0
208
53
20
15
11
1.72
4824--4853
16
1.9
16
93
6
53
13
23
56
6
1.60
10763--10960
76
2.6
76
92
0
333
21
35
26
16
1.94
16010--16035
6
4.3
6
100
0
52
65
19
15
0
1.27
16123--16155
6
5.5
6
100
0
66
36
33
0
30
1.58
16123--16162
18
2.2
18
90
0
62
37
32
2
27
1.70

Tables:   1

The End!