Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012637.1 Corchorus olitorius cultivar O-4 contig12670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21041

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4317--4479
78
2.1
79
90
2
256
35
13
0
50
1.46
4958--4993
16
2.2
16
90
0
54
5
19
47
27
1.72
13057--13096
3
13.3
3
100
0
80
67
0
0
32
0.91
16420--16577
60
2.6
60
81
6
169
38
14
15
31
1.88
17295--17627
178
1.9
178
82
5
422
34
13
16
35
1.88
18242--18572
178
1.9
177
85
5
463
35
13
16
35
1.88
20280--20329
19
2.5
20
90
9
84
44
6
6
44
1.53
20552--20594
22
2.0
22
90
4
70
41
6
2
48
1.43

Tables:   1

The End!