Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012639.1 Corchorus olitorius cultivar O-4 contig12672, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16812

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197--312
32
3.6
31
84
4
133
31
16
12
38
1.86
176--312
64
2.2
63
81
4
150
32
16
11
40
1.84
5513--5537
2
12.5
2
100
0
50
52
0
0
48
1.00
5676--5731
29
1.9
29
96
0
103
21
3
30
44
1.69
10016--10066
24
2.1
25
85
3
68
70
3
7
17
1.27
14706--14756
24
2.1
25
85
3
68
70
3
7
17
1.27

Tables:   1

The End!