Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012646.1 Corchorus olitorius cultivar O-4 contig12679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43883

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3589--3642
20
2.8
20
86
11
76
59
0
3
37
1.15
3851--3944
45
2.2
43
86
7
129
39
21
4
35
1.73
5132--5161
15
1.9
16
93
6
53
53
0
20
26
1.46
7565--7594
10
2.9
10
95
5
51
60
3
0
36
1.14
27106--27146
19
2.2
19
95
0
73
60
17
9
12
1.57
27719--27843
63
2.0
62
96
1
232
40
22
8
28
1.82
32888--32951
29
2.2
28
83
8
74
28
12
14
45
1.81

Tables:   1

The End!