Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012648.1 Corchorus olitorius cultivar O-4 contig12681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30810

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--68
6
5.2
6
92
0
53
0
0
12
87
0.55
2259--2338
31
2.5
32
85
6
90
47
33
15
3
1.63
2287--2339
17
3.1
17
80
0
61
52
32
13
1
1.51
2259--2347
16
5.5
16
72
7
72
47
33
14
4
1.65
3094--3155
25
2.5
25
72
0
70
38
20
14
25
1.91
5082--5111
14
2.1
14
100
0
60
53
20
20
6
1.67
12091--12158
9
7.6
9
89
0
91
48
0
51
0
1.00

Tables:   1

The End!