Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012651.1 Corchorus olitorius cultivar O-4 contig12684, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17242

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1272
319
4.0
321
87
4
1768
36
18
12
32
1.88
1364--1421
19
2.9
19
84
5
71
31
20
12
36
1.89
1535--1571
17
2.2
17
100
0
74
5
16
29
48
1.68
2394--2418
12
2.1
12
100
0
50
0
44
0
56
0.99
4965--5007
18
2.4
18
96
0
77
2
16
32
48
1.58
10803--10836
15
2.3
15
90
10
52
67
0
29
2
1.05
11524--11598
28
2.7
27
89
4
105
54
18
5
21
1.63

Tables:   1

The End!