Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012652.1 Corchorus olitorius cultivar O-4 contig12685, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24194

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2695--2734
11
3.7
11
90
6
64
80
17
2
0
0.83
2699--2733
5
6.8
5
93
6
61
80
17
2
0
0.84
5077--5101
10
2.5
10
100
0
50
32
0
8
60
1.26
5087--5314
60
3.8
60
86
6
334
39
12
8
39
1.74
5115--5391
65
4.2
64
82
13
346
41
13
7
37
1.73
5087--5394
125
2.4
129
88
7
439
40
12
7
38
1.72
5300--5326
4
6.8
4
100
0
54
51
22
0
25
1.48
5240--5391
75
2.0
73
92
6
252
42
14
5
36
1.70
8080--8116
19
1.9
19
94
0
65
16
29
13
40
1.86

Tables:   1

The End!