Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012655.1 Corchorus olitorius cultivar O-4 contig12688, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81789

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
208--1387
331
3.6
329
84
4
1525
36
17
16
30
1.92
7743--7787
3
14.7
3
95
4
81
66
0
31
2
1.04
25454--25642
92
2.1
92
93
2
326
23
17
19
38
1.93
34446--34523
39
2.0
39
92
0
129
37
8
19
34
1.83
39123--39157
2
17.5
2
100
0
70
48
0
0
51
1.00
44986--45011
12
2.2
12
100
0
52
23
34
15
26
1.94
48727--48769
4
10.8
4
94
0
77
48
23
2
25
1.62
50816--50864
2
27.0
2
76
19
54
53
2
44
0
1.12
50816--50864
10
4.5
11
82
12
66
53
2
44
0
1.12
81721--81789
2
34.0
2
97
2
129
49
0
49
1
1.09

Tables:   1

The End!