Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012678.1 Corchorus olitorius cultivar O-4 contig12711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24210

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12182--12207
2
13.0
2
100
0
52
50
0
50
0
1.00
12847--12936
29
3.1
29
96
0
171
35
21
12
31
1.90
14782--14817
18
2.0
18
100
0
72
44
5
5
44
1.50
14785--14825
18
2.2
18
91
4
64
48
4
4
41
1.46
14961--15012
22
2.5
21
78
9
61
69
1
5
23
1.20
19480--19505
13
2.0
13
100
0
52
53
30
0
15
1.42
23830--23855
11
2.4
11
100
0
52
7
15
7
69
1.35

Tables:   1

The End!