Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012679.1 Corchorus olitorius cultivar O-4 contig12712, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23158

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82--108
9
3.0
9
100
0
54
77
22
0
0
0.76
9783--9888
28
3.8
27
78
3
104
37
27
16
18
1.92
9813--9907
28
3.4
27
80
11
86
40
27
13
18
1.89
10163--10307
49
2.9
50
92
3
240
22
29
12
35
1.91
11349--11374
9
2.9
9
100
0
52
0
7
0
92
0.39

Tables:   1

The End!