Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012681.1 Corchorus olitorius cultivar O-4 contig12714, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31609

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9374--9514
49
2.9
46
84
9
174
51
4
15
28
1.64
23402--23438
15
2.5
15
90
0
56
18
27
13
40
1.88
24256--24397
49
3.0
46
83
9
176
50
5
16
27
1.67
26539--26577
17
2.3
17
86
0
51
33
5
10
51
1.58
28168--28358
29
6.5
29
75
10
140
19
16
23
40
1.90
30481--30505
11
2.3
11
100
0
50
8
16
8
68
1.38
31265--31321
15
3.7
15
97
2
105
12
7
14
66
1.43

Tables:   1

The End!