Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012684.1 Corchorus olitorius cultivar O-4 contig12717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25808

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9983--10061
31
2.5
31
88
8
124
31
11
20
36
1.88
10926--11019
45
2.2
43
88
7
138
38
22
5
34
1.77
15065--15131
35
1.9
35
84
0
89
25
0
32
41
1.56
19701--19750
22
2.3
22
78
0
55
54
12
16
18
1.72
19738--19780
21
2.0
21
86
8
61
51
9
13
25
1.71
19741--19845
22
4.8
23
73
11
78
40
8
13
38
1.75
24249--24348
22
4.6
22
69
18
66
39
11
12
38
1.78
24267--24324
21
2.7
21
79
12
64
43
10
10
36
1.73
24266--24433
22
7.7
21
70
19
96
38
11
13
36
1.81
24515--24657
22
6.5
22
78
0
97
34
11
17
37
1.85

Tables:   1

The End!