Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012685.1 Corchorus olitorius cultivar O-4 contig12718, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6818

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
828--1235
205
2.0
198
92
3
681
42
8
11
37
1.72
1345--1425
39
2.0
40
92
2
137
37
3
8
50
1.51
2169--2245
38
2.0
38
94
0
136
46
10
0
42
1.38
3112--3171
22
2.7
22
84
5
77
45
16
11
26
1.82
3443--3635
22
8.8
22
73
8
142
33
13
11
40
1.82
3437--3635
44
4.5
44
75
6
161
32
16
11
40
1.84
3437--3615
88
2.0
88
83
4
227
31
16
11
40
1.84
3491--3661
44
3.9
44
75
7
114
33
14
12
40
1.83

Tables:   1

The End!