Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012689.1 Corchorus olitorius cultivar O-4 contig12722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11590

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2242--2295
25
2.2
25
90
6
83
37
14
18
29
1.91
2242--2305
25
2.6
24
85
7
74
34
12
21
31
1.91
2112--2461
166
2.1
169
85
4
474
34
15
20
30
1.93
2415--2492
25
3.2
25
88
3
122
37
15
19
28
1.92
2242--2627
190
2.0
192
87
1
560
34
15
19
31
1.93
2458--2847
143
2.8
141
87
3
559
33
17
18
30
1.94
7943--8004
27
2.3
27
86
8
83
19
11
27
41
1.85
7955--8006
27
1.9
27
100
0
104
19
11
25
44
1.84
7960--8046
27
3.2
27
79
12
70
18
9
31
41
1.82

Tables:   1

The End!