Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012691.1 Corchorus olitorius cultivar O-4 contig12724, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27022

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
840--881
15
2.7
15
88
3
57
11
11
11
64
1.51
2590--2623
17
2.0
17
88
11
52
14
0
17
67
1.23
8399--8425
2
13.5
2
100
0
54
48
0
0
51
1.00
10277--10326
13
3.7
14
79
15
52
66
4
6
24
1.32
11515--11549
15
2.2
16
90
5
54
68
11
5
14
1.37
12916--12975
29
2.0
30
87
6
86
36
18
6
38
1.77
14793--14845
21
2.5
21
96
0
97
16
22
41
18
1.90
18312--18346
15
2.2
16
90
5
54
68
11
5
14
1.37
19715--19774
29
2.0
30
87
6
86
36
18
6
38
1.77

Tables:   1

The End!