Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012693.1 Corchorus olitorius cultivar O-4 contig12726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16705

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119--150
16
2.0
16
100
0
64
68
6
0
25
1.12
398--940
272
2.0
271
97
0
1023
25
19
11
43
1.85
2133--2182
24
2.1
24
100
0
100
50
4
8
38
1.51
3305--3388
30
2.8
30
81
0
114
51
3
2
42
1.32
3459--3504
12
4.3
11
78
21
53
54
0
0
45
0.99
4509--4536
1
28.0
1
100
0
56
0
0
0
100
0.00
6635--6667
17
1.9
17
93
0
57
39
0
15
45
1.46
16481--16513
7
4.7
7
85
14
50
24
0
0
75
0.80
16479--16510
15
2.2
14
94
5
55
25
0
0
75
0.81

Tables:   1

The End!