Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01012698.1 Corchorus olitorius cultivar O-4 contig12731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 109620
ACGTcount: A:0.33, C:0.18, G:0.17, T:0.32
Found at i:7029 original size:20 final size:21
Alignment explanation
Indices: 7000--7054 Score: 60
Period size: 22 Copynumber: 2.6 Consensus size: 21
6990 TGGCCTGGTG
7000 TGGCCCGGTCATGT-GCGGCA
1 TGGCCCGGTCATGTCGCGGCA
*
7020 TGGCCTGGTC-TGGTGCGCGGCA
1 TGGCCCGGTCAT-GT-CGCGGCA
*
7042 TGGCCGGGTCATG
1 TGGCCCGGTCATG
7055 GTCGGGCTGT
Statistics
Matches: 29, Mismatches: 2, Indels: 6
0.78 0.05 0.16
Matches are distributed among these distances:
19 1 0.03
20 11 0.38
22 16 0.55
23 1 0.03
ACGTcount: A:0.07, C:0.27, G:0.44, T:0.22
Consensus pattern (21 bp):
TGGCCCGGTCATGTCGCGGCA
Found at i:7042 original size:22 final size:23
Alignment explanation
Indices: 7014--7056 Score: 70
Period size: 22 Copynumber: 1.9 Consensus size: 23
7004 CCGGTCATGT
*
7014 GCGGCATGGCCTGGTC-TGGTGC
1 GCGGCATGGCCGGGTCATGGTGC
7036 GCGGCATGGCCGGGTCATGGT
1 GCGGCATGGCCGGGTCATGGT
7057 CGGGCTGTGG
Statistics
Matches: 19, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
22 15 0.79
23 4 0.21
ACGTcount: A:0.07, C:0.26, G:0.47, T:0.21
Consensus pattern (23 bp):
GCGGCATGGCCGGGTCATGGTGC
Found at i:15839 original size:24 final size:24
Alignment explanation
Indices: 15804--15855 Score: 97
Period size: 24 Copynumber: 2.2 Consensus size: 24
15794 AACTATCTCC
15804 TTGG-TTTTGTGAATCTTCTTGGT
1 TTGGTTTTTGTGAATCTTCTTGGT
15827 TTGGTTTTTGTGAATCTTCTTGGT
1 TTGGTTTTTGTGAATCTTCTTGGT
15851 TTGGT
1 TTGGT
15856 GAGGAGTTGA
Statistics
Matches: 28, Mismatches: 0, Indels: 1
0.97 0.00 0.03
Matches are distributed among these distances:
23 4 0.14
24 24 0.86
ACGTcount: A:0.08, C:0.08, G:0.27, T:0.58
Consensus pattern (24 bp):
TTGGTTTTTGTGAATCTTCTTGGT
Found at i:16100 original size:30 final size:30
Alignment explanation
Indices: 16064--16425 Score: 384
Period size: 30 Copynumber: 11.8 Consensus size: 30
16054 TTTACTCGCT
* *
16064 AATTGACACCAGAAGTTGTCATGGTTTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
*
16094 AATTGACACCAGAAGTTGTCATGACCTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
* **
16124 AATTGACACCAGAAGTTTTCATGGCCTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
**
16154 AATTGACACCAGAAGTTGTCATGGCCTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
*
16184 AATTGACACCAGAAGTTGTCATGGTCTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
* *
16214 AATTGACACCAGAAGCTGTCATGATGTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
* *
16244 AATTGACACCAGAATTTGTCATGATGTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
16274 AATTGACACCAGAAGTTGTCATGATCTTGC
1 AATTGACACCAGAAGTTGTCATGATCTTGC
** * * * *
16304 AATTGACATTTA-AAGATGTCATAATTTTATTC
1 AATTGACA-CCAGAAGTTGTCATGA-TCT-TGC
* * *
16336 AATTGGCACCAGAAGTTGTCATGATAAATTTCC
1 AATTGACACCAGAAGTTGTCATGAT---CTTGC
* ** * * * *
16369 AATAGACACTTGAAGATGTCATAATTTTATTC
1 AATTGACACCAGAAGTTGTCATGA-TCT-TGC
16401 AATTGACACCAGAAGTTGTCATGAT
1 AATTGACACCAGAAGTTGTCATGAT
16426 TTTACCTTTC
Statistics
Matches: 285, Mismatches: 38, Indels: 17
0.84 0.11 0.05
Matches are distributed among these distances:
30 214 0.75
31 8 0.03
32 40 0.14
33 20 0.07
34 3 0.01
ACGTcount: A:0.31, C:0.18, G:0.19, T:0.31
Consensus pattern (30 bp):
AATTGACACCAGAAGTTGTCATGATCTTGC
Found at i:22859 original size:23 final size:23
Alignment explanation
Indices: 22824--22869 Score: 65
Period size: 23 Copynumber: 2.0 Consensus size: 23
22814 TTTTATTATT
* *
22824 CTCTTGTCCTTTTCATAGTTCAA
1 CTCTTATCCTTTTCATACTTCAA
*
22847 CTCTTATCTTTTTCATACTTCAA
1 CTCTTATCCTTTTCATACTTCAA
22870 TTCTCTACTC
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
23 20 1.00
ACGTcount: A:0.20, C:0.26, G:0.04, T:0.50
Consensus pattern (23 bp):
CTCTTATCCTTTTCATACTTCAA
Found at i:23072 original size:32 final size:33
Alignment explanation
Indices: 23036--23101 Score: 107
Period size: 33 Copynumber: 2.0 Consensus size: 33
23026 TTATTTGACG
* *
23036 TGCATGATCT-CTTCTTCTACCTTTCTTTATCA
1 TGCATAATCTCCTCCTTCTACCTTTCTTTATCA
23068 TGCATAATCTCCTCCTTCTACCTTTCTTTATCA
1 TGCATAATCTCCTCCTTCTACCTTTCTTTATCA
23101 T
1 T
23102 AAAAATTATG
Statistics
Matches: 31, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 9 0.29
33 22 0.71
ACGTcount: A:0.17, C:0.30, G:0.05, T:0.48
Consensus pattern (33 bp):
TGCATAATCTCCTCCTTCTACCTTTCTTTATCA
Found at i:23141 original size:12 final size:12
Alignment explanation
Indices: 23121--23151 Score: 53
Period size: 12 Copynumber: 2.6 Consensus size: 12
23111 GAATGATCAA
*
23121 AATACTACCTTG
1 AATATTACCTTG
23133 AATATTACCTTG
1 AATATTACCTTG
23145 AATATTA
1 AATATTA
23152 GTGGCACCTG
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.39, C:0.16, G:0.06, T:0.39
Consensus pattern (12 bp):
AATATTACCTTG
Found at i:23183 original size:33 final size:33
Alignment explanation
Indices: 23146--23234 Score: 169
Period size: 33 Copynumber: 2.7 Consensus size: 33
23136 ATTACCTTGA
23146 ATATTAGTGGCACCTGAAGTTGTCACATCAAGC
1 ATATTAGTGGCACCTGAAGTTGTCACATCAAGC
23179 ATATTAGTGGCACCTGAAGTTGTCACATCAAGC
1 ATATTAGTGGCACCTGAAGTTGTCACATCAAGC
*
23212 ATATTAGTGGCACCTAAAGTTGT
1 ATATTAGTGGCACCTGAAGTTGT
23235 TACAAAGATA
Statistics
Matches: 55, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
33 55 1.00
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.29
Consensus pattern (33 bp):
ATATTAGTGGCACCTGAAGTTGTCACATCAAGC
Found at i:23286 original size:29 final size:28
Alignment explanation
Indices: 23244--23303 Score: 84
Period size: 29 Copynumber: 2.1 Consensus size: 28
23234 TTACAAAGAT
*
23244 ATAGTATTACTTTGACACCCGAAGTTGTC
1 ATAGTATCACTTTGACACCCGAAG-TGTC
* *
23273 ATAGTATCATTTTGACACCTGAAGTGTC
1 ATAGTATCACTTTGACACCCGAAGTGTC
23301 ATA
1 ATA
23304 TTAAGGATGG
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
28 7 0.25
29 21 0.75
ACGTcount: A:0.30, C:0.18, G:0.17, T:0.35
Consensus pattern (28 bp):
ATAGTATCACTTTGACACCCGAAGTGTC
Found at i:24687 original size:35 final size:35
Alignment explanation
Indices: 24634--24718 Score: 143
Period size: 35 Copynumber: 2.4 Consensus size: 35
24624 GGTAGTGCAC
*
24634 ATTTGATTGAAGGCTCCAGAAGAGCCAGTATTCAA
1 ATTTAATTGAAGGCTCCAGAAGAGCCAGTATTCAA
*
24669 ATTTAATTGAAGGTTCCAGAAGAGCCAGTATTCAA
1 ATTTAATTGAAGGCTCCAGAAGAGCCAGTATTCAA
*
24704 ATTTCATTGAAGGCT
1 ATTTAATTGAAGGCT
24719 TTGGAAGAGC
Statistics
Matches: 46, Mismatches: 4, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
35 46 1.00
ACGTcount: A:0.34, C:0.15, G:0.21, T:0.29
Consensus pattern (35 bp):
ATTTAATTGAAGGCTCCAGAAGAGCCAGTATTCAA
Found at i:24726 original size:35 final size:35
Alignment explanation
Indices: 24634--24728 Score: 129
Period size: 35 Copynumber: 2.7 Consensus size: 35
24624 GGTAGTGCAC
* *
24634 ATTTGATTGAAGGCTCCAGAAGAGCCAGTATTCAA
1 ATTTAATTGAAGGCTTCAGAAGAGCCAGTATTCAA
24669 ATTTAATTGAAGG-TTCCAGAAGAGCCAGTATTCAA
1 ATTTAATTGAAGGCTT-CAGAAGAGCCAGTATTCAA
* **
24704 ATTTCATTGAAGGCTTTGGAAGAGC
1 ATTTAATTGAAGGCTTCAGAAGAGC
24729 TCCAGAAGAG
Statistics
Matches: 53, Mismatches: 5, Indels: 4
0.85 0.08 0.06
Matches are distributed among these distances:
34 1 0.02
35 50 0.94
36 2 0.04
ACGTcount: A:0.34, C:0.15, G:0.23, T:0.28
Consensus pattern (35 bp):
ATTTAATTGAAGGCTTCAGAAGAGCCAGTATTCAA
Found at i:28152 original size:25 final size:24
Alignment explanation
Indices: 28126--28178 Score: 65
Period size: 23 Copynumber: 2.2 Consensus size: 24
28116 ATTTTATTAC
*
28126 TCTCTTGTCCT-TTTCATAGTTCAA
1 TCTCTTGT-CTGTTTCATACTTCAA
28150 -CTCTTGTCTGTTTCATACTTCAA
1 TCTCTTGTCTGTTTCATACTTCAA
28173 TTCTCT
1 -TCTCT
28179 ACTTCTTTGC
Statistics
Matches: 25, Mismatches: 1, Indels: 5
0.81 0.03 0.16
Matches are distributed among these distances:
22 2 0.08
23 19 0.76
25 4 0.16
ACGTcount: A:0.15, C:0.26, G:0.08, T:0.51
Consensus pattern (24 bp):
TCTCTTGTCTGTTTCATACTTCAA
Found at i:28156 original size:23 final size:23
Alignment explanation
Indices: 28127--28172 Score: 67
Period size: 23 Copynumber: 2.0 Consensus size: 23
28117 TTTTATTACT
*
28127 CTCTTGTCCT-TTTCATAGTTCAA
1 CTCTTGT-CTGTTTCATACTTCAA
28150 CTCTTGTCTGTTTCATACTTCAA
1 CTCTTGTCTGTTTCATACTTCAA
28173 TTCTCTACTT
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
22 2 0.10
23 19 0.90
ACGTcount: A:0.17, C:0.26, G:0.09, T:0.48
Consensus pattern (23 bp):
CTCTTGTCTGTTTCATACTTCAA
Found at i:29903 original size:13 final size:13
Alignment explanation
Indices: 29885--29909 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
29875 TTTGCACCAC
29885 TTGCTTCGGTCAT
1 TTGCTTCGGTCAT
29898 TTGCTTCGGTCA
1 TTGCTTCGGTCA
29910 GTTCATGTTA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.08, C:0.24, G:0.24, T:0.44
Consensus pattern (13 bp):
TTGCTTCGGTCAT
Found at i:38766 original size:27 final size:27
Alignment explanation
Indices: 38724--38776 Score: 70
Period size: 27 Copynumber: 2.0 Consensus size: 27
38714 GTAAAATCGA
**
38724 TTCAATTCGGGGCAATCCGTCAAATAG
1 TTCAATTCGGAACAATCCGTCAAATAG
**
38751 TTCAATTCGGAACAATTTGTCAAATA
1 TTCAATTCGGAACAATCCGTCAAATA
38777 AAGGCATGAG
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
27 22 1.00
ACGTcount: A:0.34, C:0.19, G:0.17, T:0.30
Consensus pattern (27 bp):
TTCAATTCGGAACAATCCGTCAAATAG
Found at i:44087 original size:30 final size:30
Alignment explanation
Indices: 44051--44112 Score: 124
Period size: 30 Copynumber: 2.1 Consensus size: 30
44041 CTAGTGTTTC
44051 AACTTCCAATTCAAGCTTCGACCTTTACGA
1 AACTTCCAATTCAAGCTTCGACCTTTACGA
44081 AACTTCCAATTCAAGCTTCGACCTTTACGA
1 AACTTCCAATTCAAGCTTCGACCTTTACGA
44111 AA
1 AA
44113 TCTTGGACAA
Statistics
Matches: 32, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
30 32 1.00
ACGTcount: A:0.32, C:0.29, G:0.10, T:0.29
Consensus pattern (30 bp):
AACTTCCAATTCAAGCTTCGACCTTTACGA
Found at i:55512 original size:17 final size:17
Alignment explanation
Indices: 55490--55530 Score: 82
Period size: 17 Copynumber: 2.4 Consensus size: 17
55480 AAATGGTGAA
55490 GGGTTCATCAATGAAGT
1 GGGTTCATCAATGAAGT
55507 GGGTTCATCAATGAAGT
1 GGGTTCATCAATGAAGT
55524 GGGTTCA
1 GGGTTCA
55531 ATGGGTAGAA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 24 1.00
ACGTcount: A:0.27, C:0.12, G:0.32, T:0.29
Consensus pattern (17 bp):
GGGTTCATCAATGAAGT
Found at i:71543 original size:21 final size:21
Alignment explanation
Indices: 71519--71561 Score: 61
Period size: 21 Copynumber: 2.0 Consensus size: 21
71509 ATGTTATTCT
*
71519 TTAAGGTTGCTAAAAAAT-TTA
1 TTAAGGTT-ATAAAAAATGTTA
71540 TTAAGGTTATAAAAAATGTTA
1 TTAAGGTTATAAAAAATGTTA
71561 T
1 T
71562 AGTATTATAA
Statistics
Matches: 20, Mismatches: 1, Indels: 2
0.87 0.04 0.09
Matches are distributed among these distances:
20 8 0.40
21 12 0.60
ACGTcount: A:0.44, C:0.02, G:0.14, T:0.40
Consensus pattern (21 bp):
TTAAGGTTATAAAAAATGTTA
Found at i:76157 original size:35 final size:36
Alignment explanation
Indices: 76111--76284 Score: 149
Period size: 35 Copynumber: 4.7 Consensus size: 36
76101 CAAGCTCTTT
*
76111 TTTTCAAATTGGGAAAGTTCCCA-CCAGTTTTTAAG
1 TTTTCAAATTGGGAAAGTTCCCATCAAGTTTTTAAG
** *
76146 TTTTCAAATTGGGAAAGTTCCCATTTAGTTTTCAAAG
1 TTTTCAAATTGGGAAAGTTCCCATCAAGTTTT-TAAG
*
76183 TTTTTTTAAATTTGGGAAAGTTCCCATCAAG-TTTT-AG
1 --TTTTCAAA-TTGGGAAAGTTCCCATCAAGTTTTTAAG
* * **
76220 TTTTCAATTTAGGGAAAGTTCCCGTCATCTTCAGTGTT-AG
1 TTTTCAAATT-GGGAAAGTTCCCATCAAGTT---T-TTAAG
*
76260 TTTTCAAAATGGGAAAGTTCCCATC
1 TTTTCAAATTGGGAAAGTTCCCATC
76285 CAAAGCATTT
Statistics
Matches: 113, Mismatches: 15, Indels: 18
0.77 0.10 0.12
Matches are distributed among these distances:
34 2 0.02
35 44 0.39
36 7 0.06
37 5 0.04
39 25 0.22
40 30 0.27
ACGTcount: A:0.28, C:0.16, G:0.17, T:0.40
Consensus pattern (36 bp):
TTTTCAAATTGGGAAAGTTCCCATCAAGTTTTTAAG
Found at i:76283 original size:74 final size:75
Alignment explanation
Indices: 76109--76284 Score: 200
Period size: 74 Copynumber: 2.4 Consensus size: 75
76099 ATCAAGCTCT
* * *
76109 TTTTTTCAAATTGGGAAAGTTCCCA-CCAGTTTTTAAGTTTTCAAATTGGGAAAGTTCCCATTTA
1 TTTTTTCAAATTGGGAAAGTTCCCATCAAGTTTTTAAGTTTTCAAATTGGGAAAGTTCCCAGTCA
*
76173 GTTTTCAAAG
66 GTCTTCAAAG
* *
76183 TTTTTTTAAATTTGGGAAAGTTCCCATCAAG-TTTT-AGTTTTCAATTTAGGGAAAGTTCCC-GT
1 TTTTTTCAAA-TTGGGAAAGTTCCCATCAAGTTTTTAAGTTTTCAAATT-GGGAAAGTTCCCAGT
**
76245 CA-TCTTCAGTG
64 CAGTCTTCAAAG
*
76256 TTAGTTTTCAAAATGGGAAAGTTCCCATC
1 TT--TTTTCAAATTGGGAAAGTTCCCATC
76285 CAAAGCATTT
Statistics
Matches: 87, Mismatches: 10, Indels: 10
0.81 0.09 0.09
Matches are distributed among these distances:
73 8 0.09
74 38 0.44
75 38 0.44
76 3 0.03
ACGTcount: A:0.27, C:0.15, G:0.17, T:0.40
Consensus pattern (75 bp):
TTTTTTCAAATTGGGAAAGTTCCCATCAAGTTTTTAAGTTTTCAAATTGGGAAAGTTCCCAGTCA
GTCTTCAAAG
Found at i:78902 original size:49 final size:49
Alignment explanation
Indices: 78849--78949 Score: 184
Period size: 49 Copynumber: 2.1 Consensus size: 49
78839 TTAATATACT
*
78849 TAATTTAATTGATAAATAAAATTACATATGAAACTTTAAAAGTTAAAGA
1 TAATTTAATTGATAAATAAAATTACATATGAAACCTTAAAAGTTAAAGA
*
78898 TAATTTAATTGATAAATAAAATTACATATTAAACCTTAAAAGTTAAAGA
1 TAATTTAATTGATAAATAAAATTACATATGAAACCTTAAAAGTTAAAGA
78947 TAA
1 TAA
78950 AGAAGGATAT
Statistics
Matches: 50, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
49 50 1.00
ACGTcount: A:0.53, C:0.05, G:0.07, T:0.35
Consensus pattern (49 bp):
TAATTTAATTGATAAATAAAATTACATATGAAACCTTAAAAGTTAAAGA
Found at i:83836 original size:22 final size:22
Alignment explanation
Indices: 83810--83851 Score: 75
Period size: 22 Copynumber: 1.9 Consensus size: 22
83800 GTCATTTTCT
*
83810 AATTCACTTTTGGCATTTAGTA
1 AATTCAATTTTGGCATTTAGTA
83832 AATTCAATTTTGGCATTTAG
1 AATTCAATTTTGGCATTTAG
83852 CATAGCTCAT
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
22 19 1.00
ACGTcount: A:0.29, C:0.12, G:0.14, T:0.45
Consensus pattern (22 bp):
AATTCAATTTTGGCATTTAGTA
Found at i:87443 original size:51 final size:51
Alignment explanation
Indices: 87313--87548 Score: 341
Period size: 51 Copynumber: 4.6 Consensus size: 51
87303 CAGATTCAAG
* * **
87313 TTTTCAAATTGGGAAAGTTCCCATCAGTTTT-TAAGTATTCAATTTAAAT-
1 TTTTCAAATTGGGAAAGTTCCCATCAGTTTTCAAAGTATTCAATCTAGCTC
* * *
87362 TTTTCAAATCGGGAAGGTTCCCACCAAGTTTTCAAAGTATTCAATCTAGCTC
1 TTTTCAAATTGGGAAAGTTCCCATC-AGTTTTCAAAGTATTCAATCTAGCTC
*
87414 TTTTCAACTTGGGAAAGTTCCCATCAGTTTTCAAAGTATTCAATCTAGCTC
1 TTTTCAAATTGGGAAAGTTCCCATCAGTTTTCAAAGTATTCAATCTAGCTC
*
87465 TTTTCAACTTGGGAAAGTTCCCATCAGTTTTCAAAGTATTCAATCTAGCTC
1 TTTTCAAATTGGGAAAGTTCCCATCAGTTTTCAAAGTATTCAATCTAGCTC
*
87516 TTTTGCAAATTGGGAAAGTTCCCACCAGGTTTT
1 TTTT-CAAATTGGGAAAGTTCCCATCA-GTTTT
87549 AGTTTTCAAT
Statistics
Matches: 169, Mismatches: 13, Indels: 6
0.90 0.07 0.03
Matches are distributed among these distances:
49 22 0.13
50 6 0.04
51 95 0.56
52 41 0.24
53 5 0.03
ACGTcount: A:0.28, C:0.19, G:0.15, T:0.37
Consensus pattern (51 bp):
TTTTCAAATTGGGAAAGTTCCCATCAGTTTTCAAAGTATTCAATCTAGCTC
Found at i:101501 original size:2 final size:2
Alignment explanation
Indices: 101494--101527 Score: 68
Period size: 2 Copynumber: 17.0 Consensus size: 2
101484 TAATTTTTCA
101494 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
101528 TAGATATTTT
Statistics
Matches: 32, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 32 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Done.