Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012705.1 Corchorus olitorius cultivar O-4 contig12738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11922

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55--96
19
2.3
18
84
8
57
61
0
4
33
1.17
60--96
19
2.0
19
89
5
58
64
0
2
32
1.07
2127--2165
18
2.1
18
85
4
51
10
7
15
66
1.43
2176--2205
14
2.1
15
93
6
53
13
13
6
66
1.43
6251--6293
6
7.3
6
97
2
79
0
13
0
86
0.58
6500--6526
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!