Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012709.1 Corchorus olitorius cultivar O-4 contig12742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4562

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2010--2105
27
3.5
27
82
2
102
38
22
17
20
1.93
2591--2790
69
2.9
68
88
3
274
28
17
28
26
1.97
2752--2989
50
4.8
50
94
0
404
27
13
29
29
1.95
3147--3320
85
2.0
87
93
2
298
37
14
18
29
1.91
3073--3346
79
3.4
79
83
11
365
36
14
18
29
1.91
3749--3852
50
2.1
50
88
0
154
37
12
15
34
1.85

Tables:   1

The End!