Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012722.1 Corchorus olitorius cultivar O-4 contig12755, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25938

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
961--999
21
1.9
20
89
5
60
0
5
15
79
0.90
2919--3110
28
6.7
28
87
5
269
38
26
17
17
1.92
2912--3110
58
3.5
58
92
2
305
38
25
18
18
1.93
4470--4541
27
2.7
27
89
4
110
36
27
19
16
1.93
5868--5901
17
2.0
17
88
0
50
76
0
17
5
0.98
7772--7844
27
2.7
27
89
6
105
17
20
24
36
1.94
14376--14405
14
2.1
14
93
0
51
33
0
26
40
1.57
15948--16021
29
2.6
29
84
4
87
12
9
39
39
1.75

Tables:   1

The End!