Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012725.1 Corchorus olitorius cultivar O-4 contig12758, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47819

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5845--5882
18
2.2
17
95
4
67
47
0
21
31
1.51
5849--5882
9
4.0
8
85
14
50
50
0
23
26
1.50
7162--7303
49
3.0
47
86
5
185
27
14
6
51
1.67
21113--21138
13
2.0
13
100
0
52
15
0
30
53
1.42
21493--21540
19
2.6
19
78
15
55
45
0
2
52
1.12
31962--32396
210
2.1
210
88
1
649
28
25
13
31
1.94
31962--32452
210
2.3
210
84
4
589
27
26
13
32
1.94
47003--47030
8
3.5
8
100
0
56
0
14
0
85
0.59

Tables:   1

The End!