Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012726.1 Corchorus olitorius cultivar O-4 contig12759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20707

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4046--4139
43
2.2
42
84
3
116
32
17
8
41
1.79
3967--4118
82
1.9
82
81
2
189
33
17
11
36
1.87
4046--4139
21
4.4
21
72
9
75
32
17
8
41
1.79
4082--4149
21
3.2
20
77
4
64
33
13
8
44
1.74
11985--12021
19
2.0
19
89
5
58
27
8
5
59
1.48
13627--13670
9
5.0
9
86
10
56
54
0
0
45
0.99
13626--13665
17
2.6
16
82
17
50
55
0
0
45
0.99
15092--15146
22
2.5
22
81
0
65
47
1
21
29
1.61
15092--15128
12
3.2
12
81
14
51
48
0
24
27
1.51
17332--17759
143
3.0
143
92
1
696
28
18
21
31
1.97
17832--18033
72
2.9
70
84
7
250
22
21
21
34
1.97
18204--18483
147
1.9
147
84
2
375
23
23
26
26
2.00
18624--18663
21
2.0
20
85
5
53
25
17
0
57
1.40
20093--20322
124
1.9
124
84
3
311
23
24
26
25
2.00
20649--20698
2
24.5
2
95
4
91
50
2
0
48
1.12

Tables:   1

The End!