Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012731.1 Corchorus olitorius cultivar O-4 contig12764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10048

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
703--793
26
3.3
26
65
26
69
35
8
26
29
1.87
690--801
58
1.9
58
98
0
215
34
8
26
30
1.85
4910--5085
96
1.8
96
97
0
334
22
23
28
25
1.99
7948--7995
11
4.7
11
80
12
50
39
10
20
29
1.86
8595--8620
11
2.4
11
100
0
52
7
15
7
69
1.35
9365--9406
15
2.7
15
92
3
66
11
9
14
64
1.50
9701--9745
22
2.0
23
82
4
56
4
6
20
68
1.29
9774--9815
19
2.2
19
91
8
68
42
9
11
35
1.74
9818--9893
25
3.0
24
75
21
73
43
7
15
32
1.76

Tables:   1

The End!