Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012732.1 Corchorus olitorius cultivar O-4 contig12765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7572

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2598--2649
21
2.5
21
87
6
70
17
48
21
13
1.81
4479--4527
11
4.7
11
80
12
59
38
10
20
30
1.86
5906--5937
15
2.1
15
94
0
55
12
9
15
62
1.54
7265--7294
2
15.0
2
92
0
51
50
3
0
46
1.18
7310--7412
52
1.9
54
86
7
147
30
21
22
26
1.99
7405--7566
43
3.9
41
87
8
236
22
11
25
41
1.86
7405--7566
84
1.9
84
97
0
306
22
11
25
41
1.86

Tables:   1

The End!