Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012741.1 Corchorus olitorius cultivar O-4 contig12774, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16385

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2786--2811
7
3.7
7
100
0
52
15
53
15
15
1.73
6148--6178
16
1.9
16
100
0
62
58
9
19
12
1.62
6539--6594
22
2.7
20
78
10
67
26
7
35
30
1.83
8699--10572
333
5.6
332
81
4
2029
33
14
16
35
1.90
8686--10572
666
2.8
666
86
3
2510
33
14
16
34
1.89
10736--10763
2
14.0
2
100
0
56
50
0
50
0
1.00
14560--14612
24
2.2
24
83
6
63
33
7
15
43
1.74
14814--14873
30
2.0
30
87
6
86
25
23
8
43
1.81
14910--15025
32
3.6
32
78
2
126
27
22
25
25
2.00

Tables:   1

The End!