Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012742.1 Corchorus olitorius cultivar O-4 contig12775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27108

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2994--3069
38
2.0
38
92
0
125
36
19
19
23
1.95
10742--10845
51
2.0
52
85
9
142
24
21
13
41
1.88
11799--12218
211
2.0
214
85
4
578
27
16
16
38
1.91
14771--14807
19
1.9
19
94
0
65
24
13
29
32
1.93
25697--25835
61
2.3
60
85
2
188
39
17
15
27
1.90
25879--26040
59
2.7
60
88
3
236
32
19
13
33
1.91
25880--25978
31
3.3
31
68
5
85
30
21
14
34
1.93

Tables:   1

The End!