Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012755.1 Corchorus olitorius cultivar O-4 contig12788, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52624

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3080--3211
63
2.1
63
97
0
246
37
19
0
41
1.57
5029--5292
124
2.1
123
79
8
268
24
26
25
23
2.00
6824--7139
147
2.1
147
87
0
452
25
27
25
21
1.99
7353--7500
72
2.1
72
97
0
278
35
20
18
25
1.96
7570--7855
143
2.0
143
89
0
437
31
21
18
28
1.97
17196--17225
15
2.1
14
93
6
51
13
16
6
63
1.50
28978--29041
18
3.5
18
76
2
65
34
3
25
37
1.72
29867--29901
18
1.9
18
100
0
70
28
40
14
17
1.88
31460--31577
31
3.8
31
89
0
155
37
27
21
14
1.92
33654--33695
16
2.6
16
92
7
68
57
0
33
9
1.31
33649--33712
16
4.0
16
80
6
58
50
0
39
10
1.38
34136--34199
33
2.0
32
91
8
105
53
20
12
14
1.72
35718--35750
16
2.1
16
88
5
50
72
9
3
15
1.21

Tables:   1

The End!